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Submitted SNP(ss) Details: ss1038417           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-514527
RefSNP(rs#)rs806721
Submitted Batch IDOVLP-000804-3
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC008993 SequenceAccession1:AC008993 SequenceVersion1:3 SequenceContigName1:Contig1 SequenceContigPosition1:14970 SequenceLocalName2:AC073186 SequenceAccession2:AC073186 SequenceVersion2:1 SequenceContigName2:Contig13 SequenceContigPosition2:12403 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1038417|allelePos=405|len=705|taxid=9606|alleles='C/T'|mol=Genomic
 AGAAGAAAAC AGGAAGAAAC AAATGTACAC TTCTTATTTA TGTTTCTTAT CTTACTGTAT
 ACTCCAAGCA TAGTATTAAT GAGCAGAGTT GAGAACCTGA CTCAGCCACT TATGCTTGCA
 CAATAGGCTC TTGAATAAAG TAGTGATAAG TGTCAAGTAT TAAGGTTTTG CATGGGTAAT
 TCAGCATGAT CTCTTATCAT TAAGGCAGTT CTAGCTACAG CCTCTGTTGA ATGTTTGACC
 TTTCAGAAAC AGTCATAGAT GTTCAGCCCT TGACATGAtt gaggcattca attggcaacg
 taatggcaca ttgtttaccc tctctacagt ggaagaatag caatttgttc ttactgggat
 aaatgtgttt tccacctgtg gctttgactc tcctgccatc aatg
 Y
 cttggccatt aaactatcca aagatgcata gaatgcctaa tgttctttgt aacacacctt
 aggacaaagg aatatatttt gtagcagaga aggtacaata atatgcatac aaccaaatga
 tccactggtg ctataatata ctatattaaa cagaatctat cagtctgata gaacattaaa
 agatatttct tttaaaggtg GATATAAAGG TGCAACTAAA TGCCAATTTA GGGATGGTAC
 TTTTCAGAGT TGGGGCTCTG TGCTTTAACA TGTTATACTT TGAACCAATG GACATTGTAA

  Submitted Frequency for ss1038417 back to top
There is no frequency submission for ss1038417.


  dbSNP summary of Genotypes for ss1038417 back to top
No sufficient data to compute Hardy-weinberg probability for ss1038417.


  Submitted individual genotype for ss1038417 back to top
There is no individual genotype data for ss1038417.