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Submitted SNP(ss) Details: ss107938279           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_25_chr1_766409
RefSNP(rs#)rs12124819
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:149

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938279|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 TTCTTCAGTA TTTTATGGGC TAAGTGCAAT CTGGCTTTTG ATAACAACGG CTGAATAATA
 TTTGAGTTTG CCAGCTGAAA TGTCCTAAAT ATCTTATTGA TTCATTTATT GCCTCTTCAA
 ATAACAAGGC AACAAGACAG TGTCAGAATG CTCAGTGTTT TTACTTTTTT GTCTATCATG
 GGATGGTGTC AGTTTCAGTA
 R
 AAACGATGTC TCTTATTTTG GTCCACATTG TAGGAATCTC ACCAGTGACA CGCGTTTGTG
 AAAAGCTGTG AATATTCAGT GCCACAGGGT TAAACCTCGG TACAGAAGCG AGACCCTGCT
 GGGCAGAGAA AGGGTGACCT GGAAGGTGTG TGAGGGCCCC GCCCATGGGC CCCTGTGATG
 GTCATGGCCT CAAGAATCAC

  Submitted Frequency for ss107938279 back to top
There is no frequency submission for ss107938279.


  dbSNP summary of Genotypes for ss107938279 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938279.


  Submitted individual genotype for ss107938279 back to top
There is no individual genotype data for ss107938279.