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Submitted SNP(ss) Details: ss107938554           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_300_chr1_1008567
RefSNP(rs#)rs9442372
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:104

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938554|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GGAACCCAGA TGCCCCCTGC CCCTAAGGCG CCCTCAGAGC TCCAGCTCGG GAAAGGGACG
 GCTTCCTCCT GCCCGGCTGT GTCCTCTCAT TTACACCCTG GGCCCCGGGG CCTGGACAAG
 GGCCAGGCGA TCCCCGAAGA CAGAGATGTG GGTCCCAGAG TATCATGCAC CTCAGGGGGC
 GACAAGCAGG CCGTAGTCCC
 R
 AGACCTCGAA TGTGACCTTA TTTAGAAGAA GGGGCTTTGC AGGGGGTTAC GTCAGGGTCT
 CAGGTGTGAT CGCCCAGGGT TCCCCGGGCA GGCCCTGAAA CAACGGCCAG GGCCCACCTG
 AGAGAGAGGC AGAGAGAGAA GACGCAGAGG TGGGGGAGAC GCCGTGGGAC CAGGGGACAG
 AGACGGGCAA CGCAGCCACA

  Submitted Frequency for ss107938554 back to top
There is no frequency submission for ss107938554.


  dbSNP summary of Genotypes for ss107938554 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938554.


  Submitted individual genotype for ss107938554 back to top
There is no individual genotype data for ss107938554.

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