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Submitted SNP(ss) Details: ss107938631           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_377_chr1_1145994
RefSNP(rs#)rs2887286
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:137

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938631|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CACCCTGAGG TCGGGGAGGC CAAGACGGAT CGGACACGGG TGGGCAGGGA ACAGCACCTC
 AGCATGCATG GGGACCCCCA AAACGCAGAG TGAATTCTAA ACACACCTCT GCTGAGTCCC
 AAAGGTAGAC GGAGGCTTCA CAGAAATGTC ACAGAGCTCT AGGTCCAGGT GGGCCATGTC
 CTGGGCAGAA AAGACCCAAA
 Y
 AAAGTGGCAC CAAGGAAAGA CAGACACAAT CAGAGTTGGG GGGCGGGCAC GGGCAAGGCC
 TCCTGCCCCA AGCACATCGC CAACAGGCCG GACCAACGGG ATGAAGCTTA AAGACGCAGT
 CAGGACAGCA GGGAACGCGG GACCGGGGTG GAGGCACGAA CCGTGTGTGG GGAGGAAAAT
 GTAAACCACT CTTTTGGAAA

  Submitted Frequency for ss107938631 back to top
There is no frequency submission for ss107938631.


  dbSNP summary of Genotypes for ss107938631 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938631.


  Submitted individual genotype for ss107938631 back to top
There is no individual genotype data for ss107938631.

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