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Submitted SNP(ss) Details: ss107943042           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_1761_chr1_2703187
RefSNP(rs#)rs2377041
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:114

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107943042|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ACTTGGGGGG TTCTGGATTT CTGCAGAGAG CTTTAGTGTG ACCCCCACCC ACACCCTTAA
 GTCATGCCCT GCCCCTGCGT GATCATTAAA GTGGAAGGCC CCCTCCCTCC TGGAGCCCCC
 TTGCTGTGGG CATGGTCCTC ACCAGCCCCT GAGTGCCTGT GCTCTGGGCA CCCGGGGTCC
 CCTCCTTCCT CAGAAGCTCA
 Y
 GATTCGGTGT GACTTTGTTG ATCATTTTCT GGTAATGCTC AACATATTTG AGCATATTTC
 CAGAAACAAA TTTTCCTGCT CACTTTGCAG CTCTCTCTAA CTGGTTCCTG CCCCACCCTC
 TCGTTGGGGT CACCAAGAAC CTCGGCACCA CACGCCCAAC GCACACTCCT TGTCCTCTCC
 TTACGGACAT TGTGGCCACT

  Submitted Frequency for ss107943042 back to top
There is no frequency submission for ss107943042.


  dbSNP summary of Genotypes for ss107943042 back to top
No sufficient data to compute Hardy-weinberg probability for ss107943042.


  Submitted individual genotype for ss107943042 back to top
There is no individual genotype data for ss107943042.

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