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Submitted SNP(ss) Details: ss107989637           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_1977896_chr8_42669139
RefSNP(rs#)rs13277254
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:134

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107989637|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 AGAACCAACC ACAATGCTCC TTTTTGTCCC CTTAGAGGTC ATGAAATAAT TTCTCAAAGT
 TTCTCCTTTT CTCATCATTA ATACCAAAAT GTCCTTTTCT TTAAAAAATC TTTTGTCTTT
 CCTGCCTTAA TAACCTTTTT AATGGTGTTG TTTTATATTC TAAAAAGTAA AAGTTATAAA
 AAGCTCAGTT GAAGGGTGTT
 R
 ACTCATACAT CAACTGGGTG ACCACAATGC TATCATGCAT GTTAGTGTGT GTGCTTGTGT
 GTGTGCACTG GAAGGAAGTA AAGCATTGAT GGTGATTGGA TTAGAATCAT GGACTGTAAG
 TGGTCTTGAA ATGTAGTATT AGGATTACAC TGCTTTCATG ATTACTAAAT GCCAATCAGA
 ACTTACATCT TCAATTGAAA

  Submitted Frequency for ss107989637 back to top
There is no frequency submission for ss107989637.


  dbSNP summary of Genotypes for ss107989637 back to top
No sufficient data to compute Hardy-weinberg probability for ss107989637.


  Submitted individual genotype for ss107989637 back to top
There is no individual genotype data for ss107989637.