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Submitted SNP(ss) Details: ss108025790           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_22338_chr1_17786644
RefSNP(rs#)rs34417109
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:114

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108025790|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GCTCACCCAG TTCCAGCCAT GCCCACCTAC CCCAGCCATC TCTCCATTGA CCAAACCTCG
 GAGATCCTGC AGCCTGGCCA ACTCCTTCTC TCTTCCAGGA GATCAGCTGG TTCCAGGAGT
 CCCAGGCCCC TCCTCTGAGG CAGAGGACGA CCCAGGAGAG GCGTTTGAGT TTGATGACAG
 TGATGATGAA GAGGACACCA
 R
 CGCAGCCCTG GGCGTCCCCA GCCTTGCTCC TGAGAGGGAC ACAGACCCCC CACTGATCCA
 CTTGGACTCC ATCCCTGTCA CTGGTAAGAT GTTTCTGGGA ACTTCCGGTC CTGGGGCTAC
 AGGGAGCATG GAGAACTGGG CGGAAGCTCC AGGCTCTCAG GGATGCCTGG TGGCCCCTCC
 GCTGTCCCCA GAAAGCAGGA

  Submitted Frequency for ss108025790 back to top
There is no frequency submission for ss108025790.


  dbSNP summary of Genotypes for ss108025790 back to top
No sufficient data to compute Hardy-weinberg probability for ss108025790.


  Submitted individual genotype for ss108025790 back to top
There is no individual genotype data for ss108025790.

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