NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss108026726           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_22565_chr1_18022153
RefSNP(rs#)rs2296035
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:103

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108026726|allelePos=201|len=401|taxid=9606|alleles='C/A'|mol=Genomic
 GGGCAGTGGA CAAGCTTCAG GGGGAGCCTG AGGTTTGACT GTTGGGTAGA GGGGGAAGCT
 GCTTATGGTG GCCTAGGCTG CCTGCACAAC TAACCCCATC CTTTGCTTCC GCAGGTCCCA
 CCCACCTCTG CCTCCGCCAT GGCTGCAAGA ACCGTTATCA TTGACCACGG GTCTGGCTTT
 TTGAAGGCTG GCACGGCCGG
 M
 TGGAATGAGC CTCAGATGGT CTTCCCGAAC ATCGTGAACT ACCTACCGTG CAAGGAGAAC
 CCTGGCCCCA GCTATGCCCG TAGGCGTGTG AGCCTGGGCA TCGACATTTG CCATCCTGAC
 ACCTTTAGCT ACCCCATCGA GCGGGGCCGC ATCCTCAACT GGGAGGGTGT GCAGTACCTC
 TGGTCATTTG TGTTGGAGAA

  Submitted Frequency for ss108026726 back to top
There is no frequency submission for ss108026726.


  dbSNP summary of Genotypes for ss108026726 back to top
No sufficient data to compute Hardy-weinberg probability for ss108026726.


  Submitted individual genotype for ss108026726 back to top
There is no individual genotype data for ss108026726.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement