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Submitted SNP(ss) Details: ss108026742           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_22569_chr1_18025169
RefSNP(rs#)rs478698
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:103

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108026742|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GTGCAGCCTT TCCACCAGGG CCGCCCCTTG CCCGCCAGCG GCAAGACGCT GGAGTTCGCC
 GGCCAGGATC TCTCCGCCTA TCTCCTCAAG AGTCTCTTTA AGGAAGATTG CGATAGACGC
 TGCCTGTTTC AGCTGGAGAC AGTCGCCGTG ACTCAGATGA ACAAGTGCTA CGTGCCGCAG
 AATCTGGGGG AGGCCCTGGA
 Y
 TTTCGTGAGA GGCAGCAGAG TGCCTTGGAT GAGAGCAACA CCTATCAGCT CCCAGACGGC
 TCCCGCGTGG AGCTGACCCC CATGCAGCGG GTGGCTCCTG AGATGTTCTT TAGCCCGCAG
 GTGTTCGAGC AGCCGGGGCC CAGCATCCCA CGGGCCATTG TGGAATCCGT GGAGTCCTGC
 GAGATCTCCC TGCGCCCCCT

  Submitted Frequency for ss108026742 back to top
There is no frequency submission for ss108026742.


  dbSNP summary of Genotypes for ss108026742 back to top
No sufficient data to compute Hardy-weinberg probability for ss108026742.


  Submitted individual genotype for ss108026742 back to top
There is no individual genotype data for ss108026742.

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