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Submitted SNP(ss) Details: ss108031404           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_23700_chr1_18624070
RefSNP(rs#)rs6603895
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:98

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108031404|allelePos=201|len=401|taxid=9606|alleles='T/A'|mol=Genomic
 TAGTTAAGGC TTATTGGTTT GGTGAGTCAT TTGGTAAGGT ATCTTTTGTT TAAAAGCAAA
 AAAAAAAAAA TGTTCAAAAG CCAAGAATAT TGGGTGTCCT GGCTGAAATC TGATAACAAA
 TTTTTAAAAA TTCTTTTAAA GATCTCTATA GTCAGAAGTC AGCTTAATTA AAAGCTAATA
 CTCAGGCTAG TATTTTTTTT
 W
 AAAAGGCTTT CTTGCTTTTT GTCCTCTGGA TCCTATTGCT GGGAAGCTTT TTAGTTGATT
 GAAACCACTT TTTAATATAT TTGGTCCCTC TGTTTGCTCC TTTTCTTGTT GGAATGACTT
 TTGCTGAGAA AAATGTCAAA CTTCATTGGC ATTTTAGAAA GCTTAAAATC TTCCCAAATT
 GGCTCCTCTA AGAATTGTCG

  Submitted Frequency for ss108031404 back to top
There is no frequency submission for ss108031404.


  dbSNP summary of Genotypes for ss108031404 back to top
No sufficient data to compute Hardy-weinberg probability for ss108031404.


  Submitted individual genotype for ss108031404 back to top
There is no individual genotype data for ss108031404.

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