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Submitted SNP(ss) Details: ss1080875           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-68690
RefSNP(rs#)rs709766
Submitted Batch IDOVLP-000804-101
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC021172 SequenceAccession1:AC021172 SequenceVersion1:3 SequenceContigName1:Contig24 SequenceContigPosition1:16972 SequenceLocalName2:AL359271 SequenceAccession2:AL359271 SequenceVersion2:5 SequenceContigName2:Contig3 SequenceContigPosition2:3942 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1080875|allelePos=101|len=201|taxid=9606|alleles='A/G'|mol=Genomic
 GCAGAAGATG TCATCTGGGC TCTCCAGCAT TAACTAAAGT AAACCCAGCA AATTCATGAA
 AGAATGAGAA AAGAGATTAA GATCATGGCG AGAAAATAAT
 R
 TTAAGACAGT TAAAAGTCTA ATTTTATAGC TATCTATAAG CAAGGTGCGT AGAGAGTCTA
 TTCTCAGAGT TCTGCCTCTG GACTAAAAGC TGCTTTTGCT

  Submitted Frequency for ss1080875 back to top
There is no frequency submission for ss1080875.


  dbSNP summary of Genotypes for ss1080875 back to top
No sufficient data to compute Hardy-weinberg probability for ss1080875.


  Submitted individual genotype for ss1080875 back to top
There is no individual genotype data for ss1080875.

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