| Submitter | | Handle | KWOK | | Submitter SNP ID | OVLP-000804-72932 | | RefSNP(rs#) | rs647812 | | Submitted Batch ID | OVLP-000804-101 | | Submitted Date | Sep 02, 2000 | | Publication Cited | [1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms | | First entry to dbSNP | Sep 2 2000 12:00:00:000AM |
| | Resource Links | | GenBank Accession | AC022786.3
AL138784.13
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | | Allele | | Observed Allele | A/G | | Ancestral Allele | | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | nonCpG |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC022786 SequenceAccession1:AC022786 SequenceVersion1:3 SequenceContigName1:Contig24 SequenceContigPosition1:1253 SequenceLocalName2:AL138784 SequenceAccession2:AL138784 SequenceVersion2:13 SequenceContigName2:Contig1 SequenceContigPosition2:19524 PolyBayesConfidence:99 |
>gnl|dbSNP|ss1081379|allelePos=830|len=1699|taxid=9606|alleles='A/G'|mol=Genomic CTTGATTGGC AGCTTCATAA AAAAGGGAAA GTTGCTGCCA GGAAAAAAGA CATTCTTAAT
CTGGGACCAC AAAGAGGTTA TGTCAGAATG CTTTCAGCTC CAAGCGATAG ATACCAAAGC
AAACAACCAT AAGAAAAATA AGGAATTTTT TAGTTCATGT AAGTGGACCA GTTTCAGGCA
CGGCTGGATC TAGGGGCTGA AACAGTCAGG GTCTGTGTCT GTCTTCACCT Cttttttttt
ttttgagacg gagtctcgct ctgttaccca ggctggagtg cagtggtgca atctcggctc
acggcaagct ccgcctccca ggttcacacc attctcctgc ctcagcctcc caagtagctg
ggactacagg tgcctgccac catgcccggc taattttttg tatttttagt agagacgggg
tttcaccatg ttagccagga tggtctcaat ctcctgacct cgtgatctgc ccaccttggc
ctcccaaaga gctgggatta caggcatgag ccaccgcgcc cggccACCTC tttttttttt
tttgagacag agtttcactc ttgttgccca ggctggagtg cagttgtgcg atctcagctc
accgcaacct ctgcctccca ggttcaagcg atcctcttgc ctcagcctcc agagtagctg
ggattacagg catgcaccac gacgtccagc taattttttt gcatttttag tagagacagg
gtttctccat gttggtcagg ctggtcttga actcctggcc tcaggtgatc cgcctgcctt
ggcctcccaa agtgctggga ttacaggcgt gagccactgc tcctggccT
R
TGTCTTCACC TCTTGTTCCT GCTTCCCTTG GTATGCTAAC TGAAGGCTTT CTCCACATGG
CCGGAAGGAT GGCTGCTGGC CATTGGTGAT CCAAAAGGAA GAGAGGCCTG GTCTGTTAAA
GCAACTgtcc ccagtctttt tggcaccagg gaccagtttc gtggaagaca atttttccac
aggtcaggac ggggtggggg gtctgatagt ttcgggatga ttcaagtgca ttacatttaa
tgtggacttc atttctatta gtattacatt gtaatatata atgaaataat tatataactc
accatcatgt agaatcagtg ggagccgtga gcatgttttc ctgcaactag acggtcccat
gtgggggtaa tgggagacag tgacagatct tcaggcatta gattctcata agaaccacaa
cctggatccc tcacacgtgc agttcacaat agggtttgcc ctcctatgag aatctaatgc
caccactgat ctgacaagag gtgcagctca ggcaataatt caagtgatgg ggagcagctg
caaatacaga tgaagcttca cttgctcacc tgccgctcac ttcctgctgt gcagcccagt
tcctaacagg ccagggactg gtaccagtcc atggcctggg ggttggaaac ccttgTCTTA
AAGCATCCTG AAACTAGAGC TTGGGGAGAG ATTCTGATTG GCTCTGCCTG GGTCATGTGT
CTACTCTTGA ACCAATTACT GTGTTTAGGA GGATGTGGTT CTGTGATTGG TGCAGTCTGG
GTCACATGTC CAGCTGTGTA ACAACAGGAT GGGAGTCAGA TGTAGTATAG GGCACTATGA
ATGCTCACCC CACTGGGATG TCAAGTGGA
There is no frequency submission for ss1081379.
No sufficient data to compute Hardy-weinberg probability for ss1081379.
There is no individual genotype data for ss1081379.
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