| Submitter | | Handle | KWOK | | Submitter SNP ID | OVLP-000804-77239 | | RefSNP(rs#) | rs647812 | | Submitted Batch ID | OVLP-000804-101 | | Submitted Date | Sep 02, 2000 | | Publication Cited | [1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms | | First entry to dbSNP | Sep 2 2000 12:00:00:000AM |
| | Resource Links | | GenBank Accession | AL138784.13
AL365439.2
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | | Allele | | Observed Allele | C/T | | Ancestral Allele | | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | nonCpG |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AL138784 SequenceAccession1:AL138784 SequenceVersion1:13 SequenceContigName1:Contig1 SequenceContigPosition1:19524 SequenceLocalName2:AL365439 SequenceAccession2:AL365439 SequenceVersion2:2 SequenceContigName2:Contig6 SequenceContigPosition2:6250 PolyBayesConfidence:99 |
>gnl|dbSNP|ss1082118|allelePos=870|len=1699|taxid=9606|alleles='C/T'|mol=Genomic TCCACTTGAC ATCCCAGTGG GGTGAGCATT CATAGTGCCC TATACTACAT CTGACTCCCA
TCCTGTTGTT ACACAGCTGG ACATGTGACC CAGACTGCAC CAATCACAGA ACCACATCCT
CCTAAACACA GTAATTGGTT CAAGAGTAGA CACATGACCC AGGCAGAGCC AATCAGAATC
TCTCCCCAAG CTCTAGTTTC AGGATGCTTT AAGAcaaggg tttccaaccc ccaggccatg
gactggtacc agtccctggc ctgttaggaa ctgggctgca cagcaggaag tgagcggcag
gtgagcaagt gaagcttcat ctgtatttgc agctgctccc catcacttga attattgcct
gagctgcacc tcttgtcaga tcagtggtgg cattagattc tcataggagg gcaaacccta
ttgtgaactg cacgtgtgag ggatccaggt tgtggttctt atgagaatct aatgcctgaa
gatctgtcac tgtctcccat tacccccaca tgggaccgtc tagttgcagg aaaacatgct
cacggctccc actgattcta catgatggtg agttatataa ttatttcatt atatattaca
atgtaatact aatagaaatg aagtccacat taaatgtaat gcacttgaat catcccgaaa
ctatcagacc ccccaccccg tcctgacctg tggaaaaatt gtcttccacg aaactggtcc
ctggtgccaa aaagactggg gacAGTTGCT TTAACAGACC AGGCCTCTCT TCCTTTTGGA
TCACCAATGG CCAGCAGCCA TCCTTCCGGC CATGTGGAGA AAGCCTTCAG TTAGCATACC
AAGGGAAGCA GGAACAAGAG GTGAAGACA
Y
Aggccaggag cagtggctca cgcctgtaat cccagcactt tgggaggcca aggcaggcgg
atcacctgag gccaggagtt caagaccagc ctgaccaaca tggagaaacc ctgtctctac
taaaaatgca aaaaaattag ctggacgtcg tggtgcatgc ctgtaatccc agctactctg
gaggctgagg caagaggatc gcttgaacct gggaggcaga ggttgcggtg agctgagatc
gcacaactgc actccagcct gggcaacaag agtgaaactc tgtctcaaaa aaaaaaaaaG
AGGTggccgg gcgcggtggc tcatgcctgt aatcccagct ctttgggagg ccaaggtggg
cagatcacga ggtcaggaga ttgagaccat cctggctaac atggtgaaac cccgtctcta
ctaaaaatac aaaaaattag ccgggcatgg tggcaggcac ctgtagtccc agctacttgg
gaggctgagg caggagaatg gtgtgaacct gggaggcgga gcttgccgtg agccgagatt
gcaccactgc actccagcct gggtaacaga gcgagactcc gtctcaaaaa aaaaaaaaGA
GGTGAAGACA GACACAGACC CTGACTGTTT CAGCCCCTAG ATCCAGCCGT GCCTGAAACT
GGTCCACTTA CATGAACTAA AAAATTCCTT ATTTTTCTTA TGGTTGTTTG CTTTGGTATC
TATCGCTTGG AGCTGAAAGC ATTCTGACAT AACCTCTTTG TGGTCCCAGA TTAAGAATGT
CTTTTTTCCT GGCAGCAACT TTCCCTTTTT TATGAAGCTG CCAATCAAG
There is no frequency submission for ss1082118.
No sufficient data to compute Hardy-weinberg probability for ss1082118.
There is no individual genotype data for ss1082118.
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