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Submitted SNP(ss) Details: ss108366654           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_105419_chr1_83302890
RefSNP(rs#)rs17109646
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:138

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108366654|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 TGAAACCTAA GACCTTCACT CTAAAAGCAT TTTATAGGAA GACAACAATC ACATAAACTG
 CATTTTCCTC ACTCCACATC AGTTCATAAA TAAGAGTGTA AACTTCCTTA GGTCAGGAAT
 CTTGATTTTA TTTCTTTGTA TCTTAGACAA GGCATTATGC AACCATGGGA TAAGTGCGGT
 TCTAGAAGCC AAGAACATCT
 R
 AGCGCCAACT CTCTCTGCAG TGTCTCACCT GTGAAGTTCA TTAACCACCC TGAAATATAA
 TATTCCTAAG ACAGTAATTA AGCATTAGTT TCCTAGCCAA CTGATATAAA ATGGAATGGA
 TATGTAAAGT ATCCGGTAGG AGACCTGGAG TTGGAGCTTT AAAAAAATGT TACTTTCACT
 TTCACTTTCT ATGAGACTTG

  Submitted Frequency for ss108366654 back to top
There is no frequency submission for ss108366654.


  dbSNP summary of Genotypes for ss108366654 back to top
No sufficient data to compute Hardy-weinberg probability for ss108366654.


  Submitted individual genotype for ss108366654 back to top
There is no individual genotype data for ss108366654.

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