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Submitted SNP(ss) Details: ss108376197           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_107764_chr1_85334134
RefSNP(rs#)rs709766
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:132

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108376197|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CTACAATTTG TTTCCACTGA GGGGTGGGTT GGGGAATACC TGGGTCCCCT TGAGAACATA
 CTCACTGTCA CTCGTATGGC CAATGTGCAC AATAAAATTA AGCAAAAGCA GCTTTTAGTC
 CAGAGGCAGA ACTCTGAGAA TAGACTCTCT ACGCACCTTG CTTATAGATA GCTATAAAAT
 TAGACTTTTA ACTGTCTTAA
 Y
 ATTATTTTCT CGCCATGATC TTAATCTCTT TTCTCATTCT TTCATGAATT TGCTGGGTTT
 ACTTTAGTTA ATGCTGGAGA GCCCAGATGA CATCTTCTGC TTCAAGTTCT GTCCGAGTGA
 TCCTAATATC ATTGCTGGAG GCTGTATCAA TGGGCAGGTA CTTAACAGAA TTTTTTTCAG
 CTATGTATTA ATGTAGACAA

  Submitted Frequency for ss108376197 back to top
There is no frequency submission for ss108376197.


  dbSNP summary of Genotypes for ss108376197 back to top
No sufficient data to compute Hardy-weinberg probability for ss108376197.


  Submitted individual genotype for ss108376197 back to top
There is no individual genotype data for ss108376197.

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