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Submitted SNP(ss) Details: ss108438186           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_122976_chr1_97049276
RefSNP(rs#)rs273882
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:111

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108438186|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 ACAAATGAGA AAATTCAGAC TTGTGAGAAG ATTGTTTTGT TTTTTTTCTG TGCTTAGCCT
 TGGCGAAAAA TCTGAGAAAA CTTAAAATAT ATAACACTGG AGTGACAATC AGGAAGAGTG
 GACTCTTTTT TTTTTTAATT TTTTTAAACA AATTAGGGAA GTAAGTTCAA TGGCTAGTGG
 TTATCATAAT AAGAAAAATT
 Y
 AAGGAAGTTA TAGGTAAAAT AAGAATTTTA CTTTTGTTTC TTTTCTGAAT GGTACCTCAT
 ATTTTGACAG CATTATCCTT TTCAGATCTG TTTTATATTT AATTGGTTTA TTATACATGT
 AAGTATGATT AGATTCATGG ATTTAACCAG TTCTTTGTAT CTTCTGTGTC AAAATGTATA
 CTGTAGTATA CTGTTTATAT

  Submitted Frequency for ss108438186 back to top
There is no frequency submission for ss108438186.


  dbSNP summary of Genotypes for ss108438186 back to top
No sufficient data to compute Hardy-weinberg probability for ss108438186.


  Submitted individual genotype for ss108438186 back to top
There is no individual genotype data for ss108438186.

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