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Submitted SNP(ss) Details: ss108453318           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_126665_chr1_99778065
RefSNP(rs#)rs12069019
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:143

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108453318|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GCCTGAGGAA TGGAGGAAGA GAAGGGGTTG TTCTTGCTGC CTCAGAGATA GCAGAGGCGA
 AAGGAAATCC ACATATAAGT GGACCTACAC AGTTTAAACC CATGTTGTTC AACAATCAAC
 TGTATTAGCA AACCTACTGA AGTCTCAAAG GCCTAGGTCT TTCCATTGAA AGCAACAGTA
 ACCTAATTCC AGTAAATCTG
 R
 GCAAAAAATA AAAATAAAAA GACACTGATG TGCTCAAAGA GAGAACTCCA TGTAAAGATG
 AAGGGAGATT AGGGTAATGC AACAGAGCCA AAGAATGCCA AAAGATTGCC AAAACCCACC
 AGAAACTAAA GGGATGCATG GAACTAATTT CTGCCTCACC CCCTAGGAAG TAACCAACCC
 TACTGATACC TGATACCTCC

  Submitted Frequency for ss108453318 back to top
There is no frequency submission for ss108453318.


  dbSNP summary of Genotypes for ss108453318 back to top
No sufficient data to compute Hardy-weinberg probability for ss108453318.


  Submitted individual genotype for ss108453318 back to top
There is no individual genotype data for ss108453318.

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