NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss108453811           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_126785_chr1_99840490
RefSNP(rs#)rs4908329
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:134

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108453811|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CTTGAGGCCA GGAATTTGAG ACCAGCCTGA GCAACATGCA AGACCCTATC TCTATCTTTT
 TAAAATAAAA ATTTTAAATT TAAAAAATGT AAAAATATGA AAAAAGCCTT ACTCAATGCC
 TGACACATAG TAGGTGCTCG GCAAATATTT GTACTCTTCT TTCAATGGCA ACCTGAGCTA
 GAACTTAAAT TCTATCCTAG
 Y
 ATTACACCAT TTCTATAAAC AATGATGTTT GCAGTGTTCA TTATCCAAGT GGCTAGTGAT
 TCTATGTTGT TTTTTAGCTC CACATTAACA AACGTTCTTG GTAAACACTG CCTCCAGTCT
 CCTCTTAGTA AAAGTTATGT GATGTAAAGT TTTCTAATGA AATTTAAGAG TCAGGAAGAA
 TAGGAATGTT CACATTTCCA

  Submitted Frequency for ss108453811 back to top
There is no frequency submission for ss108453811.


  dbSNP summary of Genotypes for ss108453811 back to top
No sufficient data to compute Hardy-weinberg probability for ss108453811.


  Submitted individual genotype for ss108453811 back to top
There is no individual genotype data for ss108453811.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement