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Submitted SNP(ss) Details: ss108576779           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_156917_chr1_148087280
RefSNP(rs#)rs12119601
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:128

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108576779|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 GTGTTCACAG TTCACAGGTA GACCCTAAAG ACAGGCTTGT GTTGTCTTTA CTGAACCCTA
 GATGCATCTC TCAAACTGTC AACTGCACAT ATCCACTTGA ATAGCAAAGA GCTTCTCAAA
 TTTCAGTCGG AACTCTGGAT CTCCCTTCAG TGTCCCAACG AATATCTTCT CTCAGTGTTC
 TATCCTAATA GTACCACTAT
 S
 TACACAGTTG CTCAAGCCAA AAATCTAGGG GTTTCACTGT TAGCTAAATC CTGTTCCTCA
 GCCACACCTA TTAATTCTAC CTCAAAGATA AAATCCAACA TTTGTTTCCA TTACCACCAT
 TGCACTCCAG CATGTCATTT ATCCGTTGTT TTTCACACTT TAGCATATAT CACCATCACC
 CAGAAAGCTT AACACAAATA

  Submitted Frequency for ss108576779 back to top
There is no frequency submission for ss108576779.


  dbSNP summary of Genotypes for ss108576779 back to top
No sufficient data to compute Hardy-weinberg probability for ss108576779.


  Submitted individual genotype for ss108576779 back to top
There is no individual genotype data for ss108576779.

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