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Submitted SNP(ss) Details: ss108672606           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_180166_chr1_165404496
RefSNP(rs#)rs12409740
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:140

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108672606|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 AATGTAATGT ACTTTCCAAA ACTGTATATA AGCTAACCAG CTTCTATCTC CTCTATCACA
 GACGGAGCTG AGCAGAGTTA AGCATTCTGA TTTCAATTCA TGAAGCAGGA AATCTTTCTG
 GCAGGTCCTG GTGAGTTTCC AGTTTGGCTG CTGACAGATA GAGAAATGTG CTTTCTATAG
 CCTCTTCCTC TCCATCCCAC
 R
 TCCACTGTGC ACATTCTTCA GAGCTGGCAA GAGTCACTGA CAGGACATGG CACCCATGGT
 TTGAAGCGCC GACTTTTCTC TGCAGGTGGC CCAGAGCCAG TGAAGGACTT TCTTGAAGCA
 CATAGCACGC CATGGTCATA CAACGGCGAT ATGTAGCCTG GGTGTCACTC ACTGAGACAC
 ATTTCCTCCC TCCACCCCCA

  Submitted Frequency for ss108672606 back to top
There is no frequency submission for ss108672606.


  dbSNP summary of Genotypes for ss108672606 back to top
No sufficient data to compute Hardy-weinberg probability for ss108672606.


  Submitted individual genotype for ss108672606 back to top
There is no individual genotype data for ss108672606.

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