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Submitted SNP(ss) Details: ss108672644           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_180175_chr1_165409905
RefSNP(rs#)rs12029632
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:126

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108672644|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GTTTCTGGGA AGAGACAAGT TCCAGAGAGG GTACAGATTG AGAATTTAGG GATGGGGACT
 TTTATAAACT GTGCCCCAAC TCCATGAAAG AATGAGGGAG AGAGAGCTCA AGGGCTCGCT
 CCACAGGGAA GGCTGGAGTG GGGGATGACT AATGCAATTA CCCATTTGGA ATTTAGCTTA
 GAAGATGAAA AGAAATAGAC
 Y
 AGAGGTGACA GGCTTAAAAA TTCCTTTTTT TTTTTTTTTT GGTTTGTTCC CAATCCTCTC
 CTAGTCCAGT GTTGGGAGAG GAGCTGCGGT AAGGAGAGTG GAGAGAGACA GAAAGGAAGG
 ATAAATAAAA AGAGATTTTA AAAAGAAAGG GAGTCTTAAT GTGGAGAGGA TCAGTAAAAA
 GTAAATAAAT AAATACAATT

  Submitted Frequency for ss108672644 back to top
There is no frequency submission for ss108672644.


  dbSNP summary of Genotypes for ss108672644 back to top
No sufficient data to compute Hardy-weinberg probability for ss108672644.


  Submitted individual genotype for ss108672644 back to top
There is no individual genotype data for ss108672644.

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