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Submitted SNP(ss) Details: ss108784392           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_207382_chr1_186592161
RefSNP(rs#)rs12021506
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:109

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108784392|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 AAGAACACAG GGATGCTGGT GTCTGGAGCC GTGGCTGTGT GGCTGAGGCT ATACCTAGGA
 GTGCAGGCTC CTGCCCTGCC AACCCAGTAA GGGGTGGGGC TCTTACCTGT ACTTGGCTCC
 CACCAGCTCT GTGGAGCGCT CAGCCCCAGC TGTGCCTTCC GTGCTGCAGC CAGCATCCTC
 ACAAAGGCAT CTCCAGAAGG
 K
 CCATCACTGC CATCAATAGG ATCAAATTTA TATGAAATTT AGAAAAAGTA CAACTATTGA
 GTTGGAAAAT AGATCAGTTG TTGTCGGGAG TTGGGAGAGG GGATAGTGAT TGACTACAGT
 GGGCAATGTG GGGGAAACTT TAGCATGAAA TAACCGTTCT ATAAGGTACT GGAATGGTGG
 ATACATAGCT CTATGTCTTT

  Submitted Frequency for ss108784392 back to top
There is no frequency submission for ss108784392.


  dbSNP summary of Genotypes for ss108784392 back to top
No sufficient data to compute Hardy-weinberg probability for ss108784392.


  Submitted individual genotype for ss108784392 back to top
There is no individual genotype data for ss108784392.

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