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Submitted SNP(ss) Details: ss108999388           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_259882_chr1_224617547
RefSNP(rs#)rs747657
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:180

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108999388|allelePos=201|len=401|taxid=9606|alleles='G/C'|mol=Genomic
 TCAGGACAGC AAGCCCCCGG CTTCTGTGCT GTCCAGGGTG CCTCGGGCTG TAGCAACAGC
 TTTGGAAACA CTTTACCTTT GACACTGTGC TTGCCCTTGG GTAACTTGCT GATATGTGAA
 GCGTGCTTCA GTTCATACCT ATTCAAAAGA GGACAGTCTC AGAAGAGGCC TTCACACTGG
 GCTCTCGAAA CCAACAGTTT
 S
 ATTAGGAGAA TAAGATCAGA TACAGAGATG AGATAAAAGT CCACAAAACC CAGACCATCT
 AAACTGCTCA GGCTCCCTCC TGAGTTTCTG GAACTGTTCC AGAACCTGAA ACTGCAGTTG
 CGGCTGAACA TAGTTTGTGC CCAGCGATCA CTGCTATGGG GCCATTTTCA AGGCAAGGCC
 CTATTTGGAG TGGTGGTCAG

  Submitted Frequency for ss108999388 back to top
There is no frequency submission for ss108999388.


  dbSNP summary of Genotypes for ss108999388 back to top
No sufficient data to compute Hardy-weinberg probability for ss108999388.


  Submitted individual genotype for ss108999388 back to top
There is no individual genotype data for ss108999388.

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