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Submitted SNP(ss) Details: ss109350841           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_3297402_chr16_55556829
RefSNP(rs#)rs11508026
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:119

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109350841|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ACTGCCATAG ACTAGATGTC ATAGTCATTA ATATATAACT GTTATCCCAA ACGTATATGA
 GTGGGGTAGA AATAAAATAT GATTGGCCAT AACTATGATT GGTCATGATT AATGTTAGAT
 GAAGTTGGAT AATGGGTAAG ATGAGAATTC TTCACACTAT TCTCTCTAAA GCGAATGGAA
 TAAAATAGAA CAGAACAGAC
 Y
 GGGAAAGCCA GATATATGTG GATTCTCCTT GCTGGGCACA GTGTGTCATA GTGGCTTATA
 ATATGGGATT TGGAGTGGGA TGGACCCAGG ATCAAATTCC CTTCTACTGA GGTTTTCTGA
 AGCCACATAA GCTGTCTGAG CCATTTCTGT CTCAGTTCAG TGGGTACAGC AATAGTGACT
 ACCTCGTGGG TAGCTGTGAG

  Submitted Frequency for ss109350841 back to top
There is no frequency submission for ss109350841.


  dbSNP summary of Genotypes for ss109350841 back to top
No sufficient data to compute Hardy-weinberg probability for ss109350841.


  Submitted individual genotype for ss109350841 back to top
There is no individual genotype data for ss109350841.

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