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Submitted SNP(ss) Details: ss109388242           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2337397_chr10_42933849
RefSNP(rs#)rs1800861
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginA:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:129

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109388242|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 TGGATGAGGC CCCTGTCCAC TGATCCCAAA GGCTGGGAGA AGCCTCAAGC AGCATCGTCT
 TTGCAGGCCT CTCTGTCTGA ACTTGGGCAA GGCGATGCAG GTCCATCCTG ACCTGGTATG
 GTCATGGAAG GGGCTTCCAG GAGCGATCGT TTGCAACCTG CTCTGTGCTG CATTTCAGAG
 AACGCCTCCC CGAGTGAGCT
 K
 CGAGACCTGC TGTCAGAGTT CAACGTCCTG AAGCAGGTCA ACCACCCACA TGTCATCAAA
 TTGTATGGGG CCTGCAGCCA GGATGGTAAG GCCAGCTGCA GGGTGAGGTG GGCAGCCACT
 GCACCCAGGC TGGGGGCTCC ATACAGCCCT GTTCTCCCTC TTTCTCCCTT TCCCTACTGC
 TCCTGCCCTG TTTCCTGTTC

  Submitted Frequency for ss109388242 back to top
There is no frequency submission for ss109388242.


  dbSNP summary of Genotypes for ss109388242 back to top
No sufficient data to compute Hardy-weinberg probability for ss109388242.


  Submitted individual genotype for ss109388242 back to top
There is no individual genotype data for ss109388242.

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