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Submitted SNP(ss) Details: ss109490775           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2363538_chr10_62169533
RefSNP(rs#)rs9414742
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:130

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109490775|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 AAGTGGAATG AGAGTATAAT GTTTATTTAT CAAGTTAGTT TTGCAATCCC ATGTAGAATA
 TGGTTAAGTA ACTTATTTTA GTGTCTATTT CCATTTCTTA ATCCTTTAAG TTTTTCTAAA
 ACATTTGAAA GGAAATAGAG ATTATCTGAT ATATGCTGTA AAATGACAAA CATTGTCTGA
 CTCAACATAT TTGAGATAAC
 Y
 AATTGTTGAT TTTAAAAATC CAGTCCCAAA GTAGCTTATG AAATAGGATA AGAAACTTCA
 TATTAGAGTT ACAGAAGACA AAATAATCAG TGTGATTCAT TCTACTTTAT CTCCACATTT
 TGACTGGAAC TTTTCATCAC TTCTTTTTAT TCACTTTGGT CTGGGATTTC AAAAACATTT
 AAAGTGATGG CAATATGTAT

  Submitted Frequency for ss109490775 back to top
There is no frequency submission for ss109490775.


  dbSNP summary of Genotypes for ss109490775 back to top
No sufficient data to compute Hardy-weinberg probability for ss109490775.


  Submitted individual genotype for ss109490775 back to top
There is no individual genotype data for ss109490775.