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Submitted SNP(ss) Details: ss109490798           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2363544_chr10_62170709
RefSNP(rs#)rs2127348
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:114

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109490798|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 AGGTACTTGA TCTACTCCAT GCATGCTTTG ATTCTAGTGC CTACGGAATT GCCTGCTTTA
 GCCTTTGTAT TTTGTAAAAC TGTTTCTAAT GGCCTTGTAT GGAACTTCTT CACCTAGGAA
 TTCTAATCAT ATACTACTTA CATGATATGA GTCTTGAACT TCAAATCTGG ATTTTTCTAT
 TTAAACCAGA AAGTAAATAA
 M
 TGTAATAAAA ATAGAAACAT ACCAACACAA CTCCCCAAAA CTATGTGCAG CAACTCTGGC
 TACACTCTCA GAGAGACCCC AACATTTTTG GTTACTTGGA CATCCTGTAA CTGATCATTT
 TATTTTGCCA CACGCTTCCC CTAGCACACT CTTTCAAGTA CAGTATATAG CTTGCTTAAA
 TTTCACATTG AAAGTTTTGG

  Submitted Frequency for ss109490798 back to top
There is no frequency submission for ss109490798.


  dbSNP summary of Genotypes for ss109490798 back to top
No sufficient data to compute Hardy-weinberg probability for ss109490798.


  Submitted individual genotype for ss109490798 back to top
There is no individual genotype data for ss109490798.