NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss109491084           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2363616_chr10_62215148
RefSNP(rs#)rs2448347
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:119

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109491084|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 TTAGTTAGAG TCTTAAGAAA AGTAGCTAGG TCAAATGAAA AAGATTTTTT TTCCTTAAAG
 TATTTGCATT GGGTGTTTTT GGAGACCTGT CTTCCTAACA GTCCAAGTTA AAATCTAATT
 GTACTTGGCT GGGGCTAGAG ATTGGAAGTA GCTTTTAAGG TCAGATACCA CTTTAAAATT
 TATTTGTATA ATTCACTTCA
 R
 TGAAAAAATA AGCTCTCAGC AATTAGTAGC CAACCTAGAT ATGTTCTTTT GAATACAGGC
 TCCTTATAAA TAAGCACCTC CTGTACAAGG CTTAATTTTA AATAGTTGCC CTGAGATTCC
 TTTCTTAAAT TTGAGTTTTG AGTCTCTTCC ATTAGGGAAG CTACTACGTC TTCCCCAGTT
 TTTATTATAG CAACTGAAAT

  Submitted Frequency for ss109491084 back to top
There is no frequency submission for ss109491084.


  dbSNP summary of Genotypes for ss109491084 back to top
No sufficient data to compute Hardy-weinberg probability for ss109491084.


  Submitted individual genotype for ss109491084 back to top
There is no individual genotype data for ss109491084.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement