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Submitted SNP(ss) Details: ss109563161           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_3349582_chr16_86420707
RefSNP(rs#)rs5014362
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:96

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109563161|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CCCACCTCCC GTTCAGCTGG GACTGCGTGA GTCCTGCAGA TAGGAGCAGC CTTCACTGGA
 TCCAGGACGG AGCCCTATGG TTGCCTTCCC ACCCCGTGCT GGGAGGTGGA TGAGGGGCTC
 ATGCTCTGAG CCCCGGACTC GCCCCCTTAA CTGAGAGGCT CGGGAGTGTC CTGGGAACAC
 AGAATCGGTG CCGCTTCCTC
 Y
 CCTGCTCTGA TCCCAGGCTG GAGAAAGGCT TCCTTCCTGA CCTCCCAGGA GCTGGAGCCC
 CGCATCCTCT CAGCGGGTGA CCCCCAAACC CCTCCCAACT TCACCCCTGC AGCTCCCTGG
 GACTGGAACC TTCCCCCTCC TCCCCGGTGG TCTCCACCTG AACATCCCTG CGCAGGCTGC
 CTGCCCCCCA CTCCCGAGGC

  Submitted Frequency for ss109563161 back to top
There is no frequency submission for ss109563161.


  dbSNP summary of Genotypes for ss109563161 back to top
No sufficient data to compute Hardy-weinberg probability for ss109563161.


  Submitted individual genotype for ss109563161 back to top
There is no individual genotype data for ss109563161.

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