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Submitted SNP(ss) Details: ss109634392           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2400167_chr10_89716725
RefSNP(rs#)rs701848
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:113

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109634392|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AAGGAAATTA GAGTTGCAGT AAACTTTCAA TGCTGCACAC AAAAAAAAGA CATTTGATTT
 TTCAGTAGAA ATTGTCCTAC ATGTGCTTTA TTGATTTGCT ATTGAAAGAA TAGGGTTTTT
 TTTTTTTTTT TTTTTTTTTT TTTTAAATGT GCAGTGTTGA ATCATTTCTT CATAGTGCTC
 CCCCGAGTTG GGACTAGGGC
 Y
 TCAATTTCAC TTCTTAAAAA AAATCATCAT ATATTTGATA TGCCCAGACT GCATACGATT
 TTAAGCGGAG TACAACTACT ATTGTAAAGC TAATGTGAAG ATATTATTAA AAAGGTTTTT
 TTTTCCAGAA ATTTGGTGTC TTCAAATTAT ACCTTCACCT TGACATTTGA ATATCCAGCC
 ATTTTGTTTC TTAATGGTAT

  Submitted Frequency for ss109634392 back to top
There is no frequency submission for ss109634392.


  dbSNP summary of Genotypes for ss109634392 back to top
No sufficient data to compute Hardy-weinberg probability for ss109634392.


  Submitted individual genotype for ss109634392 back to top
There is no individual genotype data for ss109634392.