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Submitted SNP(ss) Details: ss109890161           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_2465394_chr10_134001024
RefSNP(rs#)rs2259594
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:168

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109890161|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 TCAGGAAGTC AGTTCCGGCT CCAAAGGCCG CCGGAAGGAG TCCTGGTTCT TTTCTTTCTG
 ATTCTTTTGT CTACTGTTTA CATCTTTTAA GGGTAAGAGA TTGGGTTTTT GTTTTTTAAC
 TTAGTATATA CGGTTCTGGT TGTTAGTAGT TCTTTTGGAA ATAGATTTTG GATATATCAT
 GTTTTACAAA TTAGTTGGTT
 R
 ACAAAACATT CTCTGATTCT CTTTTCCATG GAAGCAATTG CATCTGCAAA GGAATGCCCT
 GTGTGTGATT CCTCAAGATT TCTTTCAGTT GCTTCCGAAC CTGACTTGGC TGGACCTCCG
 GTACAATAGA ATTAAAGCGC TTCCTTCTGG GATTGGAGCT CACCAGTAAG TTGTTTATGT
 TTCCAGATTT TAAAAATCAT

  Submitted Frequency for ss109890161 back to top
There is no frequency submission for ss109890161.


  dbSNP summary of Genotypes for ss109890161 back to top
No sufficient data to compute Hardy-weinberg probability for ss109890161.


  Submitted individual genotype for ss109890161 back to top
There is no individual genotype data for ss109890161.

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