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Submitted SNP(ss) Details: ss109937276           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_31_chr1_750775
RefSNP(rs#)rs1048488
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:128

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109937276|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ATTTTTGTTC TCTGAGCTTC TTTCTTAGGG AAGATCCTTC TTGAGAAGCC CCTGCTGAGT
 ATTAGGAAAA TGCATTTCAG GACCTCTCAT CAACACATCC TCTTTCTTTA CCACAACCAC
 ATATATGGGG GCATAACTCA ACATGTGTAA AAGACAATCT TCTGCTTTTC ACTGAACCTC
 CAGGAATTCA GGACAATAAA
 Y
 GTCTACATGG AGACCAACAG GTGAGTTTTT CTGCCCCTTC TTTCATAACA CCGTTCTTCC
 CTAGTGAAGT CCACACACAT CCTTACATGG CAGCTGTGGG TATATCAACT GGTCTGACCC
 CTTTTAGTCA CAGAGCCTGA AGTCTCTGCT AGTACCTGCT GAGCACAGGG TCATGGGTGA
 GAATGGGCAA GTCTTTTTCT

  Submitted Frequency for ss109937276 back to top
There is no frequency submission for ss109937276.


  dbSNP summary of Genotypes for ss109937276 back to top
No sufficient data to compute Hardy-weinberg probability for ss109937276.


  Submitted individual genotype for ss109937276 back to top
There is no individual genotype data for ss109937276.