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Submitted SNP(ss) Details: ss109937836           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_121_chr1_822781
RefSNP(rs#)rs28765502
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:121

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109937836|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 AACACTACCA GCTGTGGCAG GGGACAGACA TTGTACGGTG GGGAGGGAAT GGCCTGAGTT
 GGAAATGCCC CGGTTTAGAA CGGGCCTAGG ATGGGCCCCT CATGGTGTTT CCCGAAATCG
 GGTTCCGTTC TTCATCAAAC TTAGAGTGAC ATTGGTTAGC CCAATGATTT CCTTTTTTAC
 ATTTTGGACA TATTTCAGCT
 Y
 AGCAGTTCTC TTTTTTCCCC TATCTGACAG CCGACTCACT GATTTTTTTT CTACATTCTT
 TTTTAGTATG AATAGCTTCT TTAAATTCTT TGAGTAATTT AAAAGGAAAA GGTTCAAATG
 TAGCTATAAT ATCTCCCTGT TGATCTGGGG GGTGTATTCT AACAGGGAAC TGCCAAGCCT
 CTAAATCACC CTCTCTTCTA

  Submitted Frequency for ss109937836 back to top
There is no frequency submission for ss109937836.


  dbSNP summary of Genotypes for ss109937836 back to top
No sufficient data to compute Hardy-weinberg probability for ss109937836.


  Submitted individual genotype for ss109937836 back to top
There is no individual genotype data for ss109937836.