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Submitted SNP(ss) Details: ss109938533           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_206_chr1_864391
RefSNP(rs#)rs72902595
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:130

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109938533|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ATGGTGGGTG CGGTCCAGGC TGAGCTGGAG CAGGGGCTGG GTTCCCCTTC CATTCCTTGA
 GATGCAGGTG GGCACTCACT ACCCTCCCGC AGGTGACCTG TTGGGCAAGA GGCTGGGCCG
 CTCCCCCCGT ATCAGCAGCG ACTGCTTTTC AGAGAAGAGG GCACGAAGCG AATCGCCTCA
 AGGTAAGAGC GTGGCTGGGA
 Y
 GAGAGACAGG TCACCAGGGG AGGGGGCAGT CCCTGAGGGT CCCCTGGACC TCGAGCAGGC
 ACTCTAGAGG GGCGTGGTCC TCGGCAGTGC CTGGAGAAAC CTCTCACCCC GGGTCCTCCC
 CAGCAGAGGC GCTGCTGCTG CCGCGGGAGC TGGGGCCCAG CATGGCCCCG GAGGACCATT
 ACCGCCGGCT TGTGTCAGCA

  Submitted Frequency for ss109938533 back to top
There is no frequency submission for ss109938533.


  dbSNP summary of Genotypes for ss109938533 back to top
No sufficient data to compute Hardy-weinberg probability for ss109938533.


  Submitted individual genotype for ss109938533 back to top
There is no individual genotype data for ss109938533.

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