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Submitted SNP(ss) Details: ss109967097           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_3692_chr1_3696398
RefSNP(rs#)rs9424284
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:122

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109967097|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TCCTTGTCAG AAATGCAAGG CCCTGCTGAC GAGGTCGCAC GCTGGCCCCT CAGGCCAGCA
 CTGGGCACCC AGTGGCGGCC TCAGCAGGAA ATGAAGCCAG AGATTTCACA CATGAAGGGT
 GGATGAGGGT GGCGTCAGTT TTCACTTGTG TGAGGGAGCA AGCAGGCGCG CCCGCAAGGA
 TGTGAGGTGC ACACTGGCTT
 Y
 GGGGAGGATG AGTTACACAG GGGGTGGCTA GGGGTCCTCC TGACACCTGA TGGGATGAAA
 TGCCGTCACC TGTCACCCGG AGCTGACACT CTACTGCAGG AAACACAACC CTCGCAGTGG
 CTAAGCTGAC GGCAGCAACG TGGGTCCTGA CTCTGGCCTG GCATACCGGC TGCCTTCCGG
 GCCCATGGCT TTTGCAGGGG

  Submitted Frequency for ss109967097 back to top
There is no frequency submission for ss109967097.


  dbSNP summary of Genotypes for ss109967097 back to top
No sufficient data to compute Hardy-weinberg probability for ss109967097.


  Submitted individual genotype for ss109967097 back to top
There is no individual genotype data for ss109967097.