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Submitted SNP(ss) Details: ss109968289           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_3837_chr1_3751339
RefSNP(rs#)rs2275822
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:131

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109968289|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 AATAAATGCA GGTGTGCTAA ATAAAACAGC GACCTTAATC TTTATGTAAA TTTCAGACAA
 TCCAATCAGT GGCTTATCCA GCTCTAAACT GAATTTAGAG GCTCTAAGTC CAGAATCCTT
 TGGAAATGAC TGACCCTTTC AGGATTCTGA GGAAAGTAAA AGAAGTTCAT TGATGGGGAG
 CAGGACTCTT ACCTGGCGTA
 Y
 GTTCCTTCTA GAGCAGGGTC CTCGCTGTTG TGCCCAAGGT AGTGGTCAAT CAACTTCTCT
 CGAGAGGCCT TTGGGGGCAA AACATCTGCT TAGTGTCTCA GAGAGAAAGA GGAACAACAC
 AAAACCTTAA CTACAAGATT TATTTCATAT AAAGCTGTCA GCAAGGTTCA ATGATCCTCA
 TCTTTTGGAG AGACAGCTAA

  Submitted Frequency for ss109968289 back to top
There is no frequency submission for ss109968289.


  dbSNP summary of Genotypes for ss109968289 back to top
No sufficient data to compute Hardy-weinberg probability for ss109968289.


  Submitted individual genotype for ss109968289 back to top
There is no individual genotype data for ss109968289.

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