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Submitted SNP(ss) Details: ss109998805           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_7567_chr1_5846375
RefSNP(rs#)rs11121648
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:140

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109998805|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 GTGCATCCAA GGCCTGCCTT TGACTTCAGC GCCCGGTACA AGGATGGGAA CCAGTGCTCA
 GCCAGTGTGA CGCGTTACTT GGACTCGAAG GCACACTTAT TTCCGAGACT GAGCTGTCTA
 ACATTACCAT GAAAAGCCCT GGGCACAACA CCCTTTCCCA CACTCAGGAG AAACTTTGCT
 AAATCTCCAG CTACTAAAGA
 K
 ACAACGGGCC CACCCAACTA TGGGATGGTA CCTGTCACCG CCCTGGGGCT TTTGGAAGAC
 TGCTGGTGAT TTGAGGAACT CGCTCCTAAA TGCAGGCTAA CTGCCCTCCA TTCAGGTCCC
 CGGGTCTTCC CCTAGGAGTC CCAGGCACAG CCCCACCACA CCTGGAAGGA GTCCTCTCTG
 AACCGCAGCA GCTCCGGGTG

  Submitted Frequency for ss109998805 back to top
There is no frequency submission for ss109998805.


  dbSNP summary of Genotypes for ss109998805 back to top
No sufficient data to compute Hardy-weinberg probability for ss109998805.


  Submitted individual genotype for ss109998805 back to top
There is no individual genotype data for ss109998805.

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