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Submitted SNP(ss) Details: ss110224998           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_517492_chr2_168723919
RefSNP(rs#)rs1517342
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:117

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110224998|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AGGGTTTCTC ATGGTCTAAA TCAGGCCCTT TAATCTTCTG TTTTCTGATA AAAAGTTCTG
 AAAAAGGGAA TTTATACATA TGTAAAAGTG AGTGTTTCCC CTAAAAAAAA ACAAAAATCA
 TTATGTTTTC TATTAGGATA GCAAAAATGC CCTTTCTTAA AAACAGTGCA CACAATAATA
 TTCTCAAGGT GGGCAATGTA
 Y
 ATTACACTCA AAGAAATAAA TGCAAACTTA ACTTCTCCCC TGCTTAACTT TTATTTCAAA
 CTACAGGGCC TCAGAGGCAT AAAGATACAA AGGGGAAAGA GCAAAAACAG ACTGGGTAAA
 AACAATGTAT TATTTGTCCA GGTAGCAACA AAAAGGGACC GTCTCACCCC TGCCGTTGCT
 GAGTCTCCAC ATTCCACTCT

  Submitted Frequency for ss110224998 back to top
There is no frequency submission for ss110224998.


  dbSNP summary of Genotypes for ss110224998 back to top
No sufficient data to compute Hardy-weinberg probability for ss110224998.


  Submitted individual genotype for ss110224998 back to top
There is no individual genotype data for ss110224998.