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Submitted SNP(ss) Details: ss110525585           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_71890_chr1_62004718
RefSNP(rs#)rs11207827
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:113

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110525585|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CTTTTTTTTT CTCTCCAACA GCTCAACCAT ATACCCTCAG ATTGTTCAGC CAACTTTGAT
 TTTTCTAGGA AAGGTTTGTT AGTGTTCACA GATGGTTCCA TCACTAATGG AAATGTCCAC
 AGGCCCTCTA ATAACTCGAC TGTATCTGGG TTATTTCCGT GGACCCCGAA GTTGGGAAAT
 GAAGACTTTA ACTCAGTCAT
 Y
 CAACAGATGG CTCAGGTAAA GTTGTATCTT CTCATGGAAA TATTTAGCTT CATTTCTCCT
 GTTTTAGTTT TACAAAGGAG CTTATACTCA TTCTTTTTGC TGTAAAATGT ATTAGTATGT
 ATTTTGCTTG CTTCTATTTT TATATTGTTA GGAGAAACTG ACACCATTTT CTAACCTGTG
 TGTTGAAAAT TTATTGACTT

  Submitted Frequency for ss110525585 back to top
There is no frequency submission for ss110525585.


  dbSNP summary of Genotypes for ss110525585 back to top
No sufficient data to compute Hardy-weinberg probability for ss110525585.


  Submitted individual genotype for ss110525585 back to top
There is no individual genotype data for ss110525585.

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