NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss110534106           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_3514509_chr18_46945663
RefSNP(rs#)rs12456529
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:132

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110534106|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 CCTGGGGATG AGGAGGGGGT GGAAGCACTT CCTGAGGATC CATCCAGGCC CAGAGTTTTC
 AGCCGCCACC TCCAGAGCTC CGCCTGCCTG CTTGGCCAGG TCCAGTTGGC CCTGGCAGAA
 AGTCATCACC CTGTCCTTGC CAGCACTCCA TCCTTGGCTA TAAGTCTTAT CTGGTCAAGC
 TGCTCTCTGT ATTGGACCCT
 S
 CTGTCAAGTA TCTGGACTTC TGGGCTGATA GTCACCTTTT TTCTGTGATG TTTCTCCCTG
 GTCAGTCTCA GAATTAATAC ATTTTTCCTC TGCTAGTCCC CTCTCCTCTT CTGAAACAGC
 ATGGAGGTTC TGTCCACTCT AAACTCACCC AGGGTTTGGG CTGGGCTGGG CCGGATGCCC
 TGCATGCTGA TAACTCCATG

  Submitted Frequency for ss110534106 back to top
There is no frequency submission for ss110534106.


  dbSNP summary of Genotypes for ss110534106 back to top
No sufficient data to compute Hardy-weinberg probability for ss110534106.


  Submitted individual genotype for ss110534106 back to top
There is no individual genotype data for ss110534106.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement