>gnl|dbSNP|ss11080508|allelePos=201|len=1038|taxid=9606|alleles='G/A'|mol=Genomic
TTAAGAGACA AGAAAAAGCG TCACCTTCTT GCATACTTGA AAGTAAGAGA AAAACCAATT
ATGGTTGAAT GGAGATAAAC ATCTATTGCA TAGGTGTCAT TTTCTAGGAT TTCTCAATCT
CGCCAACTTA ACAAAAAAAT ATTGCGATAC ATGGTATTAG TGATCAAAAT ATTTGCTGCC
CTTCAAGTTG AAAGAGTACT
R
ATCCTATCTC ACTGGTTATT TCTTAGGTGT CAGGCTTGGC ATTGTGACTT GAAGGGCCCT
TCCTTGTGGA GAACATAGGC ATCCCGGATG CTTCAATGTC GGATATGGGC ACTTcttgct
ttggcttata aagtgtgggg gaagtgatgt gtgacacttc ctggcaggag ctttcagaac
cagtagatgc tatactttga ctcctctcta ctacaagact gcaatgtgcc cgacagcaat
ggtttcatta gcctgggccc cagagtaagg gtgatgtgaa gcagagctgc agccagcttg
ggatgggcat gcagtatgag caggaaattt tttgttgtta taagccactg atattttcag
gttgcttgtt attgcagtgt aatttagaca aacctgacta atacaCATAC CATCCTTACT
GCATCTGTAG GAATGGTTAC AGCAGTAACC AAAAAGAAGT GAGAATGGAA AAACAcagtc
atatgccaca tgatgatgtt tcagtcaaca acggactgca catatgatgg tggtccctta
agattataat gaaacacttt atttttactg ttccttctcc atgtttagat atatttaaat
aagcaaacac cactgtatta cagtggccta caggattcca tacagtaaca taccatgcag
gtttgtaacc tagaagcaat aggctagacc atacagccta ggtgttagta ggctatccca
cctaggtttg tgtaacgaca cgatgacatt tttcacaacg acaaaatcgc ctaatgctgc
atttctcgga acatatccct attgttaaga gacgtatgac tATATTCTTT CTGTAAT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | G=0.69911504
| A=0.30088496 | G/G=0.48672566
A/G=0.42477876
A/A=0.08849557
| Pr(chiSq=0.011,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | G=0.59302324
| A=0.40697673 | A/G=0.39534885
G/G=0.39534885
A/A=0.20930232
| Pr(chiSq=1.408,df=1)
=0.251 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | | A=0.50000000 | A/G=0.39534885
A/A=0.30232558
G/G=0.30232558
| Pr(chiSq=3.767,df=1)
=0.100 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | A=0.65044248
| G=0.34955752 | A/G=0.43362832
A/A=0.43362832
G/G=0.13274336
| Pr(chiSq=0.243,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | A=0.62244898
| G=0.37755102 | A/G=0.51020408
A/A=0.36734694
G/G=0.12244898
| Pr(chiSq=0.358,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | G=0.54878050
| A=0.45121950 | A/G=0.46341464
G/G=0.31707317
A/A=0.21951219
| Pr(chiSq=0.169,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | G=0.55882353
| A=0.44117647 | A/G=0.48235294
G/G=0.31764707
A/A=0.20000000
| Pr(chiSq=0.040,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | G=0.57386363
| A=0.42613637 | A/G=0.51136363
G/G=0.31818181
A/A=0.17045455
| Pr(chiSq=0.183,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | A=0.64444447
| G=0.35555556 | A/G=0.48888889
A/A=0.40000001
G/G=0.11111111
| Pr(chiSq=0.402,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | A=0.56999999
| G=0.43000001 | A/G=0.54000002
A/A=0.30000001
G/G=0.16000000
| Pr(chiSq=0.516,df=1)
=0.479 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | | A=0.50000000 | A/G=0.48251748
A/A=0.25874126
G/G=0.25874126
| Pr(chiSq=0.175,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | G=0.76704544
| A=0.23295455 | G/G=0.59090906
A/G=0.35227272
A/A=0.05681818
| Pr(chiSq=0.018,df=1)
=1.000 | Genotype
Freq. |
