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Submitted SNP(ss) Details: ss111154420           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_148716_chr1_152808716
RefSNP(rs#)rs3926124
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:124

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss111154420|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GGCTCTCCTT GCCTGCTTAC TTTCGTCCTG CCTTTCCCCT GCCCAGGGGT GTGGGGTACG
 GATACAGAGG AGCGGCTGGT GGAGCATCTC CTGGATCCTT CCCGCTACAA CAAGCTTATC
 CGCCCAGCCA CCAATGGCTC TGAGCTGGTG ACAGTACAGC TTATGGTGTC ACTGGCCCAG
 CTCATCAGTG TGGTGAGTAG
 R
 GGTCCCAGGC TCTCTGCCCA GCTACTGAAA TCAGCCCCGC CAAAATGTGT TAATGCTTGT
 GTGCTTCCTC CCCTGGTGTT TCCAAGGCTT GGGGAGGTGT GAGAGGGACC CTGGGTGGTG
 GCAGTGACCC CACAGGCTTA GGGGCCTTCT CGGCAGCCTC TCTTCCTCCC TGCAGCATGA
 GCGGGAGCAG ATCATGACCA

  Submitted Frequency for ss111154420 back to top
There is no frequency submission for ss111154420.


  dbSNP summary of Genotypes for ss111154420 back to top
No sufficient data to compute Hardy-weinberg probability for ss111154420.


  Submitted individual genotype for ss111154420 back to top
There is no individual genotype data for ss111154420.

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