NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss111154455           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_148720_chr1_152815570
RefSNP(rs#)rs4292956
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:106

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss111154455|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GGATTGTCTG CTGCCTCCAA GTCATGGGAG AAGAGGGGTA TAGGACAAGG GGTGGAAGGG
 CAGGAGCTCA CACCGCACCG GGCTGGCCTG ACACAATGGT AGCTCTGAAG GGAGGGGAAG
 AGAGAGGCCT GGGTGTGACC TGACACCTGC CGCTGCTTGA GTGGACAGCA GCTGGACTGG
 GTGGGCCCCA CAGTGGTCAG
 Y
 GATTCCTGCC AAGTAGGGTT TAGCCGGGCC CCATGGTCAC AGACCCCTGG GGGAGGCTTC
 CAGCTCAGTC CCACAGCCCC TTGCTTCTAA GGGATCCAGA GACCTGCTCC AGATCCTCTT
 TCCCCACTGA AGAATTCTGC ACCCTCTGGA CTTCCCTCTT CTTCCTTCCT TTCTCAGGCT
 CAAGGTGTGG GGGGCAAGGC

  Submitted Frequency for ss111154455 back to top
There is no frequency submission for ss111154455.


  dbSNP summary of Genotypes for ss111154455 back to top
No sufficient data to compute Hardy-weinberg probability for ss111154455.


  Submitted individual genotype for ss111154455 back to top
There is no individual genotype data for ss111154455.