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Submitted SNP(ss) Details: ss111868237           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_236019_chr1_224644722
RefSNP(rs#)rs1805403
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:115

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss111868237|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TCAGCAGAGG CCATGGGAAC CCCTGGCTGT CTTTCCCTAC CCTGTCCTTT GCCCCCACAT
 CTCTGCTGTC ACCATTCCTC AGTTTGCATC TCCCTGGCTT ACTGACAGTC AGCGAAGGGA
 AACAGAGGAG TGGTATGGAA CCTGTAGGGC CTTTGGGCCT CCCTTGAACC CCTCACTGAA
 CCCCCAGGGC AACCCCGCAG
 Y
 GCTCCACCCA CCCTTCACTC TTGACTCCTG GGAGCTGCTT CTTCAGGGCT TCTTTATCCT
 CTGTAGCAAG GAGGCTGAAG CCCTTGAGCT GACTCGCACT GTACTCGGGC CGGAAACCCA
 GCTCCTCCCT GTTCTTGACA AAGCAGCCTG GATGGTACCA GCGGTCAATC ATGCCTAGCT
 GTGGCTTCTC CGGGTCCACC

  Submitted Frequency for ss111868237 back to top
There is no frequency submission for ss111868237.


  dbSNP summary of Genotypes for ss111868237 back to top
No sufficient data to compute Hardy-weinberg probability for ss111868237.


  Submitted individual genotype for ss111868237 back to top
There is no individual genotype data for ss111868237.

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