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Submitted SNP(ss) Details: ss11279706           
Submitter
HandleSC_JCM
Submitter SNP IDchr9.NT_024000.15_677481
RefSNP(rs#)rs7469569
Submitted Batch IDTSC_200306
Submitted DateJul 03, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPJul 3 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC_200306
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:p1_1c048d05.p1cSCFposition:-418quality:42sequence:p1_3b438g03.p1cSCFposition:-432quality:44

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss11279706|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 GCTCTGTCAC TTGGGCTCAG GGACATCCAC ACGCCCCACT CAGCGCCAAC CCCGTCCTCC
 CCTCCCATGG GCTCAGGGAC ACCCACATGC CCCACTCAGC GCCACCCCCG TCCTCCCCTC
 CCATGGGCTC AGGGACACCG ACATGCCCCA CTCAGCGCCA CCCCCGTCCT CCCCTCCCAG
 GTTGCCTAGC TGTCCCCAGC
 Y
 TGGGCCTCCC CGAGGGCCAG ACACTCACCA GCATTATTCA TCCACAGTCT CCCAGGATCA
 GTCAGCCAAG AGACCCGAGA TTCTCAAATC ACGGCAGCCG CCAGAGGTGC CCCTGAAATC
 ACAGCTACGC CCTAGCTCAG CCCCGCCTGG AACTGTGCTC CTTTTATCTC TGCCCAAGGT
 GAGGGAACTC AGGGGACCTT

  Submitted Frequency for ss11279706 back to top
There is no frequency submission for ss11279706.


  dbSNP summary of Genotypes for ss11279706 back to top
No sufficient data to compute Hardy-weinberg probability for ss11279706.


  Submitted individual genotype for ss11279706 back to top
There is no individual genotype data for ss11279706.

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