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Submitted SNP(ss) Details: ss113065285           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_977919_chr4_55288221
RefSNP(rs#)rs3822214
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:145

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss113065285|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 TAGCTTTGCA TCCTGCCATG GGCTGTGAGT TGGGAGGTGG GGTCAGTTTG GGACTGAGTG
 GCTGTGGTAG AGATCCCATC CTGCCAAAGT TTGTGATTCC ACATTTCTCT TCCATTGTAG
 AGCAAATCCA TCCCCACACC CTGTTCACTC CTTTGCTGAT TGGTTTCGTA ATCGTAGCTG
 GCATGATGTG CATTATTGTG
 M
 TGATTCTGAC CTACAAATAT TTACAGGTAA CCATTTATTT GTTCTCTCTC CAGAGTGCTC
 TAATGACTGA GACAATAATT ATTAAAAGGT GATCTATTTT TCCCTTTCTC CCCACAGAAA
 CCCATGTATG AAGTACAGTG GAAGGTTGTT GAGGAGATAA ATGGAAACAA TTATGTTTAC
 ATAGACCCAA CACAACTTCC

  Submitted Frequency for ss113065285 back to top
There is no frequency submission for ss113065285.


  dbSNP summary of Genotypes for ss113065285 back to top
No sufficient data to compute Hardy-weinberg probability for ss113065285.


  Submitted individual genotype for ss113065285 back to top
There is no individual genotype data for ss113065285.

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