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Submitted SNP(ss) Details: ss1132006           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-369661
RefSNP(rs#)rs273867
Submitted Batch IDOVLP-000804-101
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC025489 SequenceAccession1:AC025489 SequenceVersion1:1 SequenceContigName1:Contig9 SequenceContigPosition1:8527 SequenceLocalName2:AC025706 SequenceAccession2:AC025706 SequenceVersion2:4 SequenceContigName2:Contig15 SequenceContigPosition2:1541 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1132006|allelePos=320|len=475|taxid=9606|alleles='G/A'|mol=Genomic
 GAAAAGAAGT AAGACCAAAA GAAATCATAA ATTACTTTGG ATGGAACTTT TAGAATGGCA
 GATGGAGGGA TAAATTTGAC ATTGTTCAAA ATCATAGAGT aaactctcaa aagtaagggg
 aacctaagga gacaagatga ttaaatgtaa taggagatac tggaacaaca aaaaagggac
 attagatgca atttgaggaa atctgataat ggacttttgt tgatttatcg atattggttg
 attaattgca agaactaata aattgtaata ccatactaat gtatgatgct aataatgggg
 gaactgcggt ttccaggtt
 R
 tataagaact ctgtaatgtc ttaaatttgt ttgtaaatct aaacctttta aaataGCTAA
 AAATTATAGA TACAATTTCT AAATGATTTA ATTAACAAAA CCAGTTTAAT TCTTCAGTTG
 AAATGAGCAA GGTTAGGGAT ACCTGTGTGT TTCAG

  Submitted Frequency for ss1132006 back to top
There is no frequency submission for ss1132006.


  dbSNP summary of Genotypes for ss1132006 back to top
No sufficient data to compute Hardy-weinberg probability for ss1132006.


  Submitted individual genotype for ss1132006 back to top
There is no individual genotype data for ss1132006.

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