NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss113347824           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_2134862_chr10_62200548
RefSNP(rs#)rs2456761
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:130

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss113347824|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 TTTGTTGCAT TATTTCTTAT CTCGTCTCCT CTCAAGCTCC AAAATCTCAC AAATAACCAC
 TAAAGAACTT ACTCATGTAA CCAAACACCA CCTATTCCCC AATAACCTAT GGAAATTTTA
 AAAAATTAAA AAGAACAGGT AGTCTAGTTC ATCTTTGCAT CTTTAATGGT CCTCAGATAA
 TGCCAGGCAA ACAGAAGACA
 M
 TCCGTATTTG GTGAGTGGAA CTGACACAAT TTGGAGCTTT TGTATAGTGT TATGTGTTGT
 ACTTCAGCAG CACATCCCTG CTATAAAATG ATGCACAGCA CAGAGCCAGA TAAGGGATGT
 TCATAAGGAG GCCCTCAGGC ACTACAAGAC CCTGAAGTAC TCATCTCATT TTTGAGAAAT
 GTCATTGTAG CTTTGCTCTT

  Submitted Frequency for ss113347824 back to top
There is no frequency submission for ss113347824.


  dbSNP summary of Genotypes for ss113347824 back to top
No sufficient data to compute Hardy-weinberg probability for ss113347824.


  Submitted individual genotype for ss113347824 back to top
There is no individual genotype data for ss113347824.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement