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Submitted SNP(ss) Details: ss113504506           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_1554727_chr7_27913380
RefSNP(rs#)rs200
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:131

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss113504506|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 TAAAAACTGA AGAGAAAGTT GCACTAAGGC TCTTAGAGTT TTAAATCCAG TATTCAGCTG
 GGAACACAGC CTGGTGGGTG AAAAAATCTA GGTTCTGAAG GCAAACTCTT AATCTGAGTT
 AGTTGGTGTT CAAGCTTAGA AAATTAATGA CTCCTTCTCA TCTTGGGGTC CTCCTTATAA
 AACAGAGGTA ATCCTAACAC
 Y
 TACCTCATGG GGTTTATTAT CAACATCTCA TTGGATAAAT GCATGAAAAG CCCTTGGCTC
 CACATAATAC TCAATATATG TTAGGAGACC ACTCAGAGTT GTGGTATTTC CATGGGTGCT
 GGCCTTGTGC TCCTGACCCT TTCCCAGGAA GGAGAAATTG TTTATAAATT TAACTGCCAT
 CTAGGAGAAT TCTTACATAA

  Submitted Frequency for ss113504506 back to top
There is no frequency submission for ss113504506.


  dbSNP summary of Genotypes for ss113504506 back to top
No sufficient data to compute Hardy-weinberg probability for ss113504506.


  Submitted individual genotype for ss113504506 back to top
There is no individual genotype data for ss113504506.

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