Submitter | Handle | WI_SSAHASNP | Submitter SNP ID | chr1.NT_004321.15_1032216 | RefSNP(rs#) | rs7530315 | Submitted Batch ID | WI-WGS-200306-A | Submitted Date | Jul 03, 2003 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Jul 3 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004321
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | WI-WGS-200306 | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | A/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:S213P65215RH6.T0position:459quality:37sequence:S213P60284FB8.T0position:446quality:41 |
>gnl|dbSNP|ss11378609|allelePos=3258|len=5343|taxid=9606|alleles='A/T'|mol=Genomic ACCAGGCTAt ggagggatag ggttgagggc ctcattaccg ggcggaacag gcagaaggtt
gagaccccta cagcagggct gaacagggac agggttgaga taaaacagga gggtttttat
aaagcttaaa taagctgagt acttagtact ggcttgtccc atggtgtccc cggaatactc
tgagtgctct agcttaccac caagcttact gaccacaatc ctcaggaatc tctggtcaaa
atcctctgct gaatcccaca ctcagggtgc aacttcacac agcgagagag agccccacgt
tggagcgccg gatgtaggga ccagccccac agtgttggtg cgttctgctc cccatgtgcg
gagatgagag attgtagaaa taaagacaca agacaaagag ataaaaagaa aagacagctg
ggcctggggg accaccacca ccaagacgcg gagaccggta gtggccccga atgcctggct
gcactgttat ttattggata caaaccaaaa gggacagggt aaagagtgtg agtcatctcc
aatgataggt aaggtcatgt gggtcacatg tccactggac agggggccct ttcctgcctg
gcagccgagg cagagagaga gggggagaga gagagagaga cagcttacgc cattatttct
gcttatcata gacttttagt actttcacta atttgctact gttatctaaa aggcaaagcc
aggtgtgcag gatggaacat gaaggcggac taggagcgtg accactgaag cacagcatca
cagggagacg gttaggcctc cggataactg cgggcgagcc taactgatgt caggccctcc
acaagaggtg gaggagcaga gtcttctcta aactccccca gggaaaggga gactcctaag
tagcaggtgt ttttccttga cactgatgct actgctagac cacggtctgc ctggcaacgg
gcatcttccc agacgctggt gttaccgcta gaccaaggag ccctctggtg accctgtctg
ggcataacag aaggctcgca ctatcgtctt ctggtcactt ctcaccatgt cccctcagcc
cccatctctg tatggcctgg tttttcctag gttatgatta tagagcaagg attattataa
tattggaata aagagcaatt gctacaaact aatgattaat gatattcata tataatcatg
tctgtgatct agatctagta taactcttgt tgttttatat attttattat actggaatag
ctcgtgccct tggtctcttg tctcggcacc tggatggctt gctgcccaca gatgtctggg
tcatttccaa ttcagaaaag actgtgctat gggaaaatgt gtttctaaaa attatggaat
tgtttcattt acaaaataac atctgatagt tcaagatttc ttgcttcctg ggttttcact
aaaatttaag gttactaaga ataggaattc taattaatat ataattctgt aaatTGTGtt
attgagagaa aaaataattt tatgtaattt gaaagttgtt taaaagttat ttatgaagaa
agataaaaag aaactaatag gtaggggaga gagtaataaa acaagttttg gctatgaaga
tgtatttttg gtaaggatat gaagaaaata aaataatttt atataagaaa ggatattatg
tggtaaattc ttatcctaaa gtaaaatgac tagaaaagag agaagtatca gacacgtcag
aaagtccaaa catgttgtag atggtcagtg taggttgtga taaggtttgt aaagggcaat
tACCTGAGAC TGGGTAATTT ATTtttattt atttatttat ttatttattt attttttgag
acagagtctc gctctgtcgc ccaggctgga gtgcagtggc gcgatctcgg ctcactgcaa
gctccacctc ctgggttcat gccattctcc tgcctcagcc tcctgagtag ctgggactac
aggtgcctgc caccatgccc ggataatttt tttttttttt tttgtatttt tagtagaaat
cgggtttcac cgtgttagcc aggatggtct cgatctcctg accttgtgat cagcccgcct
cagcctccca aagtgctggg attacaggtg tgagccactg tgcctggctg agactgggta
atttataaag aggtttgatt ggctcaacgt tctacaggct gtggaggaag tatggccatg
agcatcttct tggggaggca tcagggagct tttactcagg gcggaggcga agcaggagct
agagagtgag ggggaggtgc cacacacttt caaacaagca gataactctc tgttatcagg
acaggaccaa gcggatggtg ctaacctctt catgagaaat ccgcccccat gatccagtca
cctactacca ggcccctcct ccaacactga ggattacatt tcattatgag atgtgggcag
ggacacagat ccaaaccata tcaAActcac cactgcactc cagcctgggt ggcagagccc
agcagactcc CAGAGTTGAG GAGACAGCTG AGAAGCCAAG GTCAGGGTGG CTAGGGTCAG
GGGACAGGGC ACCCTTAGCT TGAGCACCTC CACTGAGCAC CAGCCACTCT CTTCTTATGG
GGCAACTCCC AGCACTGGAC ACtttttttt ttttgagatg gagtctcact ctgtcatcca
ggctggagtg tagtggcgca atcctggctc gttgcaacct ccacctcctg ggttcaagca
attctcctgc ctcagcctcc aactagctgg gattactgac acctgccacc acacctgact
gatttttgta tttttactag agacaggggt tcaccatgtt gcctaggctg gtctcgaact
cctgaccgca agtaatctgc ctgccttggc ctcccaaagt gctgggatta caggtgtgag
ccaccatgcc tggccACTGG ATGCATTTTA GACAGGACCA CTCAGGgggt gtagtagctc
acacctgtaa tcccagcact ttgggaggct gaggtgggag gatcagttga gctcaggagt
tccagaccag cctgggcaac atagtgagat tcccctgtac aaaaatgtaa aaattagctg
ggtgtggtgg catgtgcctg tagttccagc tactgaggag gctgaggcag gaggatcagt
tgagcccagg aggttgaagg ttgcaaccag ctgagatcac accactgcac tgcagtctgg
atgacagagc aagaccc
W
atctcaaaca ataataaaca aaGAGGATCA GGtgtcttag tctgcttgtt ataacaaaat
acctgagaca gggtaattta tagaaagcag aggtttcttt ctaacagccg tggaggctgg
gagtccaagc atcctctgga gggagagagg gaaggcaggc tgtgtcctca cagggtggaa
ggtggagggg gatcccacac ccaagacccc ccacccactt ttttttttga gatggagttt
cactcttgtt gcccaggctg gagtgcaatg gcacgatcgc ggctcaccgc aacctccacc
tcccgggttc aagtgattct cctgcctcag cctcccaagt agctgagatt acaggcatgt
gccaccacgc ctggctaatt ttgtattttt agtagagacg gggtttctcc atgttggtca
ggctagtctc gaactcccga cctcaggtga tctgcctgcc ttggcctcgc aaagtgctgg
gattacaggc atgagccact gcgcccggcc cacttttttt ttttgagaca gggtctcact
ctgtcaccca ggctgagtgc actggcatga tcatggctca cttcagcctt gacctccagg
gctcatgtga tcctcctgcc tctgctaccc aaataggtgg cactacaggc acatgccacc
atgcccagct aattttatat tttttgtaga gatggggtct ctctttgttg cccaggttgg
tcttgaactc ctggacgccg gtgatcctct catctcggtc tcccaaaggc tgggtttata
ggtgtgagcc actgtgtctg gccccaagtc cttttattgt tgcacaaatc caaccatgag
ggcagggcct atggtcaggc cccacctgtc tatactgttg caccgggcag tgagtttcca
gcctgtgaat ttgtggggca cattcaCCTC CCAGCACCAG GAAACAGAAT GCTGCCTGAC
GCTGCTACCT AGAGTAACAC AGtgttgcac gctgaaagag tgagggtcat gatcaactca
gtataccact ggaggcgacg tgagtaaaca gcaaactgtt tctcatacat gcagaatgtt
ggcaaacaaa ctgcgtctgc cacctagaag gaatgctgag ggcagtcacg cctcaagcac
agtgtttctt gtgattaggt acatctgaag cctgttagta acaatatgaa cctgtgatca
attaagcagc tgaccgatcg ttacctcctc ctccctcctc ctgctaccca ataaatagga
agggctgtgg aagctcgggc ggtgcctttg ctcactagaa gcagggagct ctcttcttct
tccccgtgtt acccttccgt taaaatagtt acttttgttt taagttttca tttctatgtt
tgtccctctt ccttcagtct cataatgatg gtctcaagta gtaacagcag tctgccacaA
CACAGGAGGT GTGAAATCCA CATTACAGAG GCAAATGGGT TGCTGAGGAC ACTGATGTTG
GTGATCAAAT AGTTTGTGGG GGgcctgggc aacatggtga gaacccacct ctactataca
tatatataca aaaattagct gggggtggtg gcttgtgcct gtagtcccag ctactcagga
gactgacgtg ggaagatggc ttgagccctg gagttggaga ctgcagtgag tcatggtagc
accactgcac tccagcctgg gcaacagagt gagaccctgt ctctggaatt aaaaaaaaaa
GGTCCAggct gggcgtagtg gctcacgcct gtaatcccag cactttggga agccgaggtg
ggtggatcac ctgaggttgg gagttcgaga ccagcctggc caatatagta aaaccctgtc
tctactaaaa ttacaaaaat tagccaggtg tggtggcagg tgcctgtagt cccagctact
tgggaggctg aggcaggaga atcccttgaa cccgggaggc ggaggttgca gtgagccgag
attgcaccac tgcactccag cctgggtgac agagtgagac tccgtctcaa aaaaaaaaaa
aaaGTTCCCC TGCCTGGCCC TGCTCCAGGG CTTCATTCTC AGGAA
There is no frequency submission for ss11378609.
No sufficient data to compute Hardy-weinberg probability for ss11378609.
There is no individual genotype data for ss11378609.
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